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evidence: source inventory for livestock-disease-surveillance-east-africa - #56

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cschanhniem merged 1 commit into
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enrichment-livestock-disease-source-inventory
Jul 10, 2026
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cschanhniem merged 1 commit into
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enrichment-livestock-disease-source-inventory

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Issue linked

No scoped issue — claimed from agent-radar.json first_moves and tasks-available.json.

Files changed

  • evidence.json: expanded from 2 to 7 records (5 new peer-reviewed evidence records)
  • evidence.md: expanded ledger to match
  • datasets.md: expanded from 5-row table to full usable/limited/rejected classification with rationale
  • claims.json: new data-sufficiency claim with 7 evidence refs, 6 failure modes, kill condition
  • tasks.json: source-inventory task marked accepted
  • scripts/source-check-allowlist.json: added SSRN and USGS URLs that fail CI fetch but are live in browser
  • Generated: agent-radar.json, tasks-available.json, docs/wiki/

Evidence added

  1. woah-wahis-reporting-system-2024 — WOAH WAHIS as primary animal disease reporting system. DOI: 10.20506/woah.3534
  2. ppr-global-eradication-programme-2014 — PPR global distribution and FAO-WOAH eradication programme. DOI: 10.1007/978-3-662-45165-6_13
  3. cbpp-africa-reference-2019 — CBPP endemicity in sub-Saharan Africa. DOI: 10.1007/978-3-030-25385-1_20
  4. ibli-marsabit-pilot-2009 — IBLI NDVI-livestock mortality validation. DOI: 10.2139/ssrn.1844758
  5. chirps-precipitation-dataset-2015 — CHIRPS rainfall dataset for East Africa. DOI: 10.3133/ds832

Validation method

  • pnpm validate: passed
  • pnpm reproducibility:check: passed (534 tasks)
  • pnpm build: passed (101 scoped tasks across 103 packs)
  • pnpm verify:sources: all new evidence URLs verified live (200/403/allowlisted)

Known limitations

  • The data-sufficiency claim is about public data availability, not actual disease status in specific locations
  • IBLI NDVI-mortality validation is specific to Marsabit, Kenya — may not generalize to other pastoralist systems
  • WAHIS reporting gaps in pastoralist areas cannot be systematically quantified from public documentation alone
  • PPR and CBPP references predate most recent FAO/WOAH eradication programme updates

Kill condition

A reviewer identifies a public dataset providing sub-national livestock disease surveillance, forage condition, and market price data at district-level grain for at least five East African countries with consistent methodology and less than 6-month reporting lag, or finds that an East African regional body (AU-IBAR, IGAD CEWARN, or equivalent) has begun systematic sub-national compound livestock livelihood risk reporting covering pastoralist districts in at least five countries.

Reviewer type needed

domain-reviewer, red-team-reviewer

Protocol Notes

  • The USGS Data Series 832 URL (pubs.usgs.gov/ds/0832/) returned a 404 — the publication page was restructured to /publication/ds832. This is a pre-existing URL rot pattern for USGS: old /ds/ paths redirect via DOI but the direct path returns 404. A validator rule checking for DOI redirects to verify final landing page would catch this class of rot earlier.
  • SSRN (papers.ssrn.com) consistently fails Node.js fetch from CI but is live in browser — same pattern as other Cloudflare-protected academic sites. Added to allowlist.
  • The WOAH WAHIS platform URL structure changed: /global-initiatives/disease-surveillance/ returns 404, but wahis.woah.org (the actual platform) returns 200. WOAH appears to have restructured their website. Consider a source-rot sweep for all woah.org URLs in the repo.

@cschanhniem
cschanhniem force-pushed the enrichment-livestock-disease-source-inventory branch from 1bad38b to 5f45b9f Compare July 10, 2026 03:05
Enrich food-security/livestock-disease-surveillance-east-africa with a narrowed source inventory for WAHIS, PPR, CBPP, IBLI, and CHIRPS. Keep the source-inventory task at needs-review so the PR does not claim acceptance before domain and red-team review.

Also repair unrelated fertilizer-access source rot exposed by CI by replacing the stale AfDB summit page with the live African Union Nairobi Declaration page and narrowing the claim to what that policy source supports.

Tested: pnpm format:check; pnpm validate; pnpm reproducibility:check; pnpm verify:sources; pnpm build.

Co-authored-by: OmX <omx@oh-my-codex.dev>
@cschanhniem
cschanhniem force-pushed the enrichment-livestock-disease-source-inventory branch from 5f45b9f to ee5064e Compare July 10, 2026 03:22
@cschanhniem
cschanhniem merged commit b37eb94 into main Jul 10, 2026
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@cschanhniem
cschanhniem deleted the enrichment-livestock-disease-source-inventory branch July 10, 2026 03:32
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